Archive for the 'Education' Category

Training courses attended

Biacore T200 SPR biosensor (GE Healthcare Life Sciences): 8-10 August 2017, Sabanci University

AKTA pure chromatography system (GE Healthcare Life Sciences): July 2017, Sabanci University

 

Posted by sofiap on Sep 12th 2017 | Filed in Education | Comments Off on Training courses attended

Academic Experiences

Teaching Experience

Teaching Assistant for Science of Nature I (NS101) at Sabanci University since Spring 2014 to present

Facilitator for Academic Practices and Development (GR501) graduate course at Sabanci University, Fall 2017

 

Articles, Conference Posters and Presentations

Design of target specific transcription activator-like effectors by free energy perturbation calculations. Sofia Piepoli, Batu Erman, Canan Atılgan

– 2. International BAU Drug Design Congress -Bahçeşehir University Istanbul, Turkey, April 2014

– Biophysical Society Modeling of Biomolecular Systems Interactions, Dynamics, and Allostery Meeting, Istanbul, Turkey, September 2014

– 2. Management Committee CMST COST Action CM1306 Meeting, Visegrád, Hungary, September 2014

Analysis on Target specific Transcription Activator-like Effectors by Free Energy Perturbation Calculations and Perturbation-Response Scanning. Sofia Piepoli, Batu Erman, Canan Atılgan

– 22. Statistical Physics Days, Istanbul Technical University, Ayazağa Kampüsü, Istanbul, Turkey, June 2015

Analysis of TALE and its Specific Target DNA Interactions by Free Energy Perturbation Calculations and Perturbation-Response Scanning. Sofia Piepoli, Batu Erman, Canan Atılgan

– 3. International BAU Drug Design Congress -Bahçeşehir University Istanbul, Turkey,  October 2015

Characterization of PATZ1 protein structure and its interaction with the tumor suppressor protein p53. Sofia Piepoli

–  The FEBS Journal Special Issue for the 41st FEBS Congress, September 2016 (scheduled)

PATZ-1 transcription regulator: Structure Determination Study. Sofia Piepoli

– “Lights, Mixing, Action!” COST Workshop for the Action CM1306 -Porto, Portugal, October 2016

Thermodynamic Constraints Determine the Position Preferences of Critical Amino Acids in TALE DNA Binding Proteins. Sofia Piepoli, Batu Erman, Canan Atılgan (to be submitted)

The protein structure of the PATZ1 BTB domain reveals new functions. Sofia Piepoli, Aaron Alt, Erika Mancini, Batu Erman

–  MolBiyoKon’17, 5th International Congress of the Molecular Biology Association of Turkey, Istanbul, Boğaziçi University, September 2017

Additional information

  • Registered User for beamtime at Diamond Light Source since July 2016.
  • Invited speaker at the 23. Statistical Physics Days, Istanbul Technical University, Ayazağa Kampüsü, Istanbul, Turkey, June 2016
  • Participant in the European Cooperation in Science and Technology (COST) Project – CM1306 Action, since September 2014. cost.eu
  • Certificate of Completion of all required training and internship for the Teaching Scholars Residency Program at Sabanci University during 2014-2015 academic year.
  • TOEFL score: 109, July 2014

 

Posted by sofiap on May 16th 2017 | Filed in Education | Comments Off on Academic Experiences

Education

  • 2018 Ph.D. candidate Molecular Biology, Genetics and Bioengineering – Sabanci University, Istanbul – TURKEY
  • 2013 M.Sc. Bioinformatics – University of Bologna, ITALY
  • 2011 B.Sc. Biological Sciences – Università del Salento, Lecce – ITALY

Posted by sofiap on Jul 27th 2016 | Filed in Education | Comments Off on Education